Published Articles
Blassel Luc,
Medvedev Paul
& Chikhi Rayan.
"Mapping-friendly sequence reductions: going beyond homopolymer compression"
in
iScience:
p.105305.
(2022)
10.1016/j.isci.2022.105305
Blassel Luc,
Zhukova Anna,
Villabona-Arenas Christian J,
Atkins Katherine E,
Hué Stéphane
& Gascuel Olivier.
"Drug resistance mutations in HIV: new bioinformatics approaches and challenges"
in
Current Opinion in Virology
(51):
p.56-64.
(2021)
10.1016/j.coviro.2021.09.009
Blassel Luc,
Tostevin Anna,
Villabona-Arenas Christian Julian,
Peeters Martine,
Hué Stéphane
& Gascuel Olivier.
"Using machine learning and big data to explore the drug resistance landscape in HIV"
in
PLOS Computational Biology
(17):
p.e1008873.
(2021)
10.1371/journal.pcbi.1008873
Zhukova Anna,
Blassel Luc,
Lemoine Frédéric,
Morel Marie,
Voznica Jakub
& Gascuel Olivier.
"Origin, evolution and global spread of SARS-CoV-2"
in
Comptes Rendus. Biologies
(344):
p.57-75.
(2021)
10.5802/crbiol.29
Lemoine Frédéric,
Blassel Luc,
Voznica Jakub
& Gascuel Olivier.
"COVID-Align: Accurate online alignment of hCoV-19 genomes using a profile HMM"
in
Bioinformatics
(37):
p.1761-1762.
(2020)
10.1093/bioinformatics/btaa871
Preprints
-
Nesterenko Luca,
Blassel Luc,
Veber Philippe,
Boussau Bastien
& Jacob Laurent.
"Phyloformer: Fast, accurate and versatile phylogenetic reconstruction with deep neural networks"
(2024)
10.1101/2024.06.17.599404
Talks
-
"Phyloformer: fast, accurate and versatile phylogenetic reconstruction with deep neural networks",
June 20 2024,
MCEB 2024
, slides
, source
-
"Mapping-friendly sequence reductions: Going beyond homopolymer compression",
May 21 2022,
RECOMB-SEQ 2022
, slides
-
"Can we improve analyses by transforming DNA ?",
May 21 2022,
RECOMB-SEQ/CCB Joint COmmunication Session 2022
, slides
*second place award for jargon-free scientific communication